Index

A

A_ (imml.cluster.SIMCADC attribute) add_missing_mods (class in imml.preprocessing)

AddMissingMods (class in imml.preprocessing) affinity_matrix_ (imml.cluster.NEMO attribute) Amputer (class in imml.ampute)

B

B_ (imml.cluster.DAIMC attribute)

beta_ (imml.cluster.EEIMVC attribute) (imml.cluster.OSLFIMVC attribute)

C

C_ (imml.cluster.OSLFIMVC attribute) check_Xs (class in imml.utils) cluster_model_ (imml.cluster.IntegrAO attribute) concatenate_mods (class in imml.preprocessing) ConcatenateMods (class in imml.preprocessing) configure_optimizers() (imml.classify.M3Care method) (imml.classify.MUSE method) (imml.classify.RAGPT method) (imml.cluster.IntegrAO method) (imml.cluster.MRGCN method)

convert_dataset_format (class in imml.utils) cophenet_list_ (imml.cluster.SUMO attribute)

D

DAIMC (class in imml.cluster) DFMF (class in imml.decomposition)

DFMFImputer (class in imml.impute) drop_mod (class in imml.preprocessing) DropMod (class in imml.preprocessing)

E

EEIMVC (class in imml.cluster) embedding_ (imml.cluster.DAIMC attribute) (imml.cluster.EEIMVC attribute) (imml.cluster.IMSCAGL attribute) (imml.cluster.IMSR attribute) (imml.cluster.IntegrAO attribute) (imml.cluster.LFIMVC attribute) (imml.cluster.MKKMIK attribute) (imml.cluster.NEMO attribute) (imml.cluster.OMVC attribute) (imml.cluster.OPIMC attribute) (imml.cluster.OSLFIMVC attribute) (imml.cluster.PIMVC attribute) (imml.cluster.SIMCADC attribute) (imml.cluster.SUMO attribute)

F

factors_ (imml.decomposition.MOFA attribute) features_mod_mean_list_ (imml.impute.SimpleModImputer attribute) fit() (imml.ampute.Amputer method) (imml.cluster.DAIMC method) (imml.cluster.EEIMVC method) (imml.cluster.IMSCAGL method) (imml.cluster.IMSR method) (imml.cluster.LFIMVC method) (imml.cluster.MKKMIK method) (imml.cluster.MONET method) (imml.cluster.NEMO method) (imml.cluster.OMVC method) (imml.cluster.OPIMC method) (imml.cluster.OSLFIMVC method) (imml.cluster.PIMVC method) (imml.cluster.SIMCADC method) (imml.cluster.SUMO method) (imml.feature_selection.JNMFFeatureSelector method) (imml.impute.SimpleModImputer method) (imml.preprocessing.MultiModTransformer method) (imml.preprocessing.NormalizerNaN method) (imml.retrieve.MCR method)

fit_predict() (imml.cluster.DAIMC method) (imml.cluster.EEIMVC method) (imml.cluster.IMSCAGL method) (imml.cluster.IMSR method) (imml.cluster.LFIMVC method) (imml.cluster.MKKMIK method) (imml.cluster.MONET method) (imml.cluster.NEMO method) (imml.cluster.OMVC method) (imml.cluster.OPIMC method) (imml.cluster.OSLFIMVC method) (imml.cluster.PIMVC method) (imml.cluster.SIMCADC method) (imml.cluster.SUMO method) (imml.retrieve.MCR method) fit_transform() (imml.feature_selection.JNMFFeatureSelector method) (imml.impute.DFMFImputer method) (imml.impute.JNMFImputer method) (imml.impute.MOFAImputer method) (imml.retrieve.MCR method) fused_networks_ (imml.cluster.IntegrAO attribute) fuser_ (imml.decomposition.DFMF attribute)

G

gamma_ (imml.cluster.MKKMIK attribute) get_com_samples (class in imml.explore) get_incom_samples (class in imml.explore) get_missing_mod_indicator (class in imml.impute) get_missing_samples_by_mod (class in imml.explore) get_n_com_samples (class in imml.explore) get_n_incom_samples (class in imml.explore) get_n_mods (class in imml.explore)

get_n_samples_by_mod (class in imml.explore) get_observed_mod_indicator (class in imml.impute) get_pct_com_samples (class in imml.explore) get_pct_incom_samples (class in imml.explore) get_samples (class in imml.explore) get_samples_by_mod (class in imml.explore) get_summary (class in imml.explore) glob_var_ (imml.cluster.MONET attribute) graph_ (imml.cluster.SUMO attribute)

H

H_ (imml.decomposition.JNMF attribute)

HP_ (imml.cluster.EEIMVC attribute) (imml.cluster.LFIMVC attribute)

I

IMSCAGL (class in imml.cluster)

IMSR (class in imml.cluster) IntegrAO (class in imml.cluster)

J

JNMF (class in imml.decomposition)

JNMFFeatureSelector (class in imml.feature_selection) JNMFImputer (class in imml.impute)

K

KA_ (imml.cluster.MKKMIK attribute)

kmeans_ (imml.cluster.MRGCN attribute)

L

labels_ (imml.cluster.DAIMC attribute) (imml.cluster.EEIMVC attribute) (imml.cluster.IMSCAGL attribute) (imml.cluster.IMSR attribute) (imml.cluster.LFIMVC attribute) (imml.cluster.MKKMIK attribute) (imml.cluster.MONET attribute) (imml.cluster.NEMO attribute) (imml.cluster.OMVC attribute) (imml.cluster.OPIMC attribute) (imml.cluster.OSLFIMVC attribute) (imml.cluster.PIMVC attribute) (imml.cluster.SIMCADC attribute) (imml.cluster.SUMO attribute)

LFIMVC (class in imml.cluster) loss_ (imml.cluster.EEIMVC attribute) (imml.cluster.IMSR attribute) (imml.cluster.LFIMVC attribute) (imml.cluster.MKKMIK attribute) (imml.cluster.OMVC attribute) (imml.cluster.OSLFIMVC attribute) (imml.cluster.PIMVC attribute) (imml.cluster.SIMCADC attribute)

M

M3Care (class in imml.classify) M3CareDataset (class in imml.load) MCR (class in imml.retrieve) memory_bank_ (imml.retrieve.MCR attribute) missing_reconstruction_err_ (imml.decomposition.JNMF attribute) MissingModIndicator (class in imml.impute) MKKMIK (class in imml.cluster) mod_graphs_ (imml.cluster.MONET attribute) mod_views_ (imml.cluster.MONET attribute)

MOFA (class in imml.decomposition) mofa_ (imml.decomposition.MOFA attribute) MOFAImputer (class in imml.impute) MONET (class in imml.cluster) MRGCN (class in imml.cluster) MRGCNDataset (class in imml.load) MultiModTransformer (class in imml.preprocessing) MUSE (class in imml.classify) MUSEDataset (class in imml.load)

N

n_clusters_ (imml.cluster.MONET attribute) (imml.cluster.NEMO attribute) n_iter_ (imml.cluster.EEIMVC attribute) (imml.cluster.IMSR attribute) (imml.cluster.LFIMVC attribute) (imml.cluster.MKKMIK attribute) (imml.cluster.OMVC attribute) (imml.cluster.OSLFIMVC attribute) (imml.cluster.PIMVC attribute) (imml.cluster.SIMCADC attribute)

NEMO (class in imml.cluster) nmf_ (imml.cluster.SUMO attribute) NormalizerNaN (class in imml.preprocessing) num_neighbors_ (imml.cluster.NEMO attribute)

O

observed_reconstruction_err_ (imml.decomposition.JNMF attribute) ObservedModIndicator (class in imml.impute) OMVC (class in imml.cluster)

on_fit_end() (imml.cluster.MRGCN method) OPIMC (class in imml.cluster) OSLFIMVC (class in imml.cluster)

P

pac_list_ (imml.cluster.SUMO attribute) pid (class in imml.statistics) PIMVC (class in imml.cluster) plot_missing_modality (class in imml.visualize) plot_pid (class in imml.visualize)

predict() (imml.retrieve.MCR method) predict_step() (imml.classify.M3Care method) (imml.classify.MUSE method) (imml.classify.RAGPT method) (imml.cluster.IntegrAO method) (imml.cluster.MRGCN method)

R

RAGPT (class in imml.classify) RAGPTDataset (class in imml.load) reconstruction_err_ (imml.decomposition.JNMF attribute)

relchange_ (imml.decomposition.JNMF attribute) remove_mods (class in imml.ampute) RemoveMods (class in imml.ampute)

S

same_transformer_ (imml.preprocessing.MultiModTransformer attribute) select_complete_samples (class in imml.preprocessing) select_incomplete_samples (class in imml.preprocessing) SelectCompleteSamples (class in imml.preprocessing) selected_features_ (imml.feature_selection.JNMFFeatureSelector attribute) SelectIncompleteSamples (class in imml.preprocessing) set_fit_request() (imml.ampute.Amputer method) (imml.cluster.DAIMC method) (imml.cluster.EEIMVC method) (imml.cluster.IMSCAGL method) (imml.cluster.IMSR method) (imml.cluster.LFIMVC method) (imml.cluster.MKKMIK method) (imml.cluster.MONET method) (imml.cluster.NEMO method) (imml.cluster.OMVC method) (imml.cluster.OPIMC method) (imml.cluster.OSLFIMVC method) (imml.cluster.PIMVC method) (imml.cluster.SIMCADC method) (imml.cluster.SUMO method) (imml.feature_selection.JNMFFeatureSelector method) (imml.impute.DFMFImputer method) (imml.impute.JNMFImputer method) (imml.impute.MOFAImputer method) (imml.impute.SimpleModImputer method) (imml.preprocessing.MultiModTransformer method)

set_transform_request() (imml.ampute.Amputer method) (imml.feature_selection.JNMFFeatureSelector method) (imml.impute.DFMFImputer method) (imml.impute.JNMFImputer method) (imml.impute.MOFAImputer method) (imml.impute.SimpleModImputer method) (imml.preprocessing.MultiModTransformer method) SIMCADC (class in imml.cluster) similarity_ (imml.cluster.SUMO attribute) SimpleModImputer (class in imml.impute) single_mod (class in imml.preprocessing) SingleMod (class in imml.preprocessing) sort_data (class in imml.preprocessing) SortData (class in imml.preprocessing) SUMO (class in imml.cluster)

T

t_ (imml.decomposition.DFMF attribute) test_step() (imml.classify.M3Care method) (imml.classify.MUSE method) (imml.classify.RAGPT method) (imml.cluster.IntegrAO method) (imml.cluster.MRGCN method) total_weight_ (imml.cluster.MONET attribute) training_step() (imml.classify.M3Care method) (imml.classify.MUSE method) (imml.classify.RAGPT method) (imml.cluster.IntegrAO method) (imml.cluster.MRGCN method)

transform() (imml.ampute.Amputer method) (imml.feature_selection.JNMFFeatureSelector method) (imml.impute.JNMFImputer method) (imml.impute.SimpleModImputer method) (imml.preprocessing.MultiModTransformer method) (imml.preprocessing.NormalizerNaN method) (imml.retrieve.MCR method) transformer_ (imml.decomposition.DFMF attribute) transformer_list_ (imml.preprocessing.MultiModTransformer attribute) ts_ (imml.decomposition.DFMF attribute)

U

U_ (imml.cluster.DAIMC attribute) (imml.cluster.OMVC attribute)

V

V_ (imml.cluster.OMVC attribute) (imml.cluster.SIMCADC attribute) (imml.decomposition.JNMF attribute) validation_step() (imml.classify.M3Care method) (imml.classify.MUSE method) (imml.classify.RAGPT method) (imml.cluster.IntegrAO method) (imml.cluster.MRGCN method)

W

weights_ (imml.decomposition.MOFA attribute) (imml.feature_selection.JNMFFeatureSelector attribute)

WP_ (imml.cluster.EEIMVC attribute) (imml.cluster.LFIMVC attribute) (imml.cluster.OSLFIMVC attribute)

Z

Z_ (imml.cluster.SIMCADC attribute)